Thursday, September 6, 2012

A biofuels breakthrough?

Generally speaking, I am not much of a fan of biofuels.  The only example of a commercial-scale biofuel is ethanol and right now, it requires valuable food inputs such as corn or sugar-cane to produce.  Even worse, there is little evidence that the energy contained in such ethanol is actually greater than the energy it takes to make it.  But just because no current biofuel makes much thermodynamic or economic sense does not mean that no biofuel will ever make economic sense.

And so I am intrigued by this bulletin out of M.I.T. which seems to indicate that it is possible to turn carbon dioxide or garbage into isobutanol using a bioengineered bug.  I make no claims that this line of research will ever lead to a useful product, but I DO understand why folks want to pursue it.  Many things (airplanes, boats, farm equipment) require liquid fuels so there's a huge incentive to make something like this work.

Teaching a microbe to make fuel

Genetically modified organism could turn carbon dioxide or waste products into a gasoline-compatible transportation fuel.
David L. Chandler, MIT News Office

A humble soil bacterium called Ralstonia eutrophahas a natural tendency, whenever it is stressed, to stop growing and put all its energy into making complex carbon compounds. Now scientists at MIT have taught this microbe a new trick: They’ve tinkered with its genes to persuade it to make fuel — specifically, a kind of alcohol called isobutanol that can be directly substituted for, or blended with, gasoline.

Christopher Brigham, a research scientist in MIT’s biology department who has been working to develop this bioengineered bacterium, is currently trying to get the organism to use a stream of carbon dioxide as its source of carbon, so that it could be used to make fuel out of emissions. Brigham is co-author of a paper on this research published this month in the journal Applied Microbiology and Biotechnology.

Brigham explains that in the microbe’s natural state, when its source of essential nutrients such as nitrate or phosphate is restricted, “it will go into carbon-storage mode,” essentially storing away food for later use when it senses that resources are limited.

“What it does is take whatever carbon is available, and stores it in the form of a polymer, which is similar in its properties to a lot of petroleum-based plastics,” Brigham says. By knocking out a few genes, inserting a gene from another organism and tinkering with the expression of other genes, Brigham and his colleagues were able to redirect the microbe to make fuel instead of plastic.

While the team is focusing on getting the microbe to use CO2 as a carbon source, with slightly different modifications the same microbe could also potentially turn almost any source of carbon, including agricultural waste or municipal waste, into useful fuel. In the laboratory, the microbes have been using fructose, a sugar, as their carbon source.

At this point, the MIT team — which includes chemistry graduate student Jingnan Lu, biology postdoc Claudia Gai, and is led by Anthony Sinskey, professor of biology — have demonstrated success in modifying the microbe’s genes so that it converts carbon into isobutanol in an ongoing process.

“We’ve shown that, in continuous culture, we can get substantial amounts of isobutanol,” Brigham says. Now, the researchers are focused on optimizing the system to increase the rate of production and designing bioreactors to scale the process up to industrial levels.

Unlike some bioengineered systems in which microbes produce a desired chemical within their bodies but have to be destroyed to retrieve the product, R. eutrophanaturally expels the isobutanol into the surrounding fluid, where it can be continuously filtered out without stopping the production process, Brigham says. “We didn’t have to add a transport system to get it out of the cell,” he says. more

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